sample_gender
/home/thomas/BIT11/GIT/MultiQC_CMGG/test_data/ngsbits
Sex prediction
This table show the results of the sex prediction with the expected sex and some metrics.
| Sample Name | Certainty of sex match | Calculated Sex | Calculated sex (XY method) | Calculated sex (SRY method) | Calculated sex (HETX method) | ChrY/ChrX reads ratio | Coverage SRY | Fraction HETX |
|---|---|---|---|---|---|---|---|---|
| Person1 | 100% | F | F | F | F | 0.0085 | 0.00 | 0.3759 |
| test1 | 33% | M | M | F | unknown (too few SNPs) | 0.2232 | 1.63 | N/A |
| test2 | 67% | F | F | F | unknown (too few SNPs) | 0.0039 | 0.00 | N/A |
| test3 | 67% | F | F | F | unknown (too few SNPs) | 0.0038 | 0.00 | N/A |