sample_gender

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        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411
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        About MultiQC

        This report was generated using MultiQC, version 1.29

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

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        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        sample_gender

        Report generated on 2025-06-04, 14:14 CEST based on data in: /home/thomas/BIT11/GIT/MultiQC_CMGG/test_data/ngsbits

        Sex prediction

        This table show the results of the sex prediction with the expected sex and some metrics.

        Showing 4/4 rows and 8/8 columns.
        Sample NameCertainty of sex matchCalculated SexCalculated sex (XY method)Calculated sex (SRY method)Calculated sex (HETX method)ChrY/ChrX reads ratioCoverage SRYFraction HETX
        Person1100%FFFF
        0.0085
        0.00
        0.3759
        test133%MMFunknown (too few SNPs)
        0.2232
        1.63
        N/A
        test267%FFFunknown (too few SNPs)
        0.0039
        0.00
        N/A
        test367%FFFunknown (too few SNPs)
        0.0038
        0.00
        N/A

        MultiQC v1.29 - Available on GitHub.
        Written by Phil Ewels - Modified by Matthias De Smet